Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Gene expression markers for Airway goblet cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
1
Mm Hs MUC16 0.001 0 0.25 0.002 0.001 3 Airway goblet cells Mesoderm Lungs FLJ14303 mucin 16, cell surface associated flag
1
Mm Hs DUSP4 0.011 0 0 0.041 0.004 1 Airway goblet cells Mesoderm Lungs HVH2,MKP-2,TYP dual specificity phosphatase 4 flag
1
Mm Hs GGH 0.069 0 0.375 0.108 0.057 1 Airway goblet cells Mesoderm Lungs gamma-glutamyl hydrolase flag
1
Mm Hs MUC5B 0.002 0 0.25 0.009 0 4 Airway goblet cells Mesoderm Lungs MG1 mucin 5B, oligomeric mucus/gel-forming Yflag
0
Mm Hs MUC5AC 0 0 0 0 0.001 4 Airway goblet cells Mesoderm Lungs mucin 5AC, oligomeric mucus/gel-forming flag
0
Mm Hs GALNT6 0.007 0 0.125 0.001 0.008 1 Airway goblet cells Mesoderm Lungs GalNAc-T6 polypeptide N-acetylgalactosaminyltransferase 6 flag
0
Mm Hs GALNT5 0.001 0 0 0.003 0.001 1 Airway goblet cells Mesoderm Lungs GalNAc-T5 polypeptide N-acetylgalactosaminyltransferase 5 flag
0
Mm Hs LTF 0.016 0 1 0.006 0.018 4 Airway goblet cells Mesoderm Lungs HLF2 lactotransferrin flag
0
Mm Hs GOLPH3 0.069 0 0.375 0.029 0.078 1 Airway goblet cells Mesoderm Lungs GPP34,GOPP1,MIDAS,Vps74 golgi phosphoprotein 3 flag
0
Mm Hs CEACAM1 0.024 0 0.25 0.019 0.026 5 Airway goblet cells Mesoderm Lungs BGP1,CD66a,BGP carcinoembryonic antigen related cell adhesion molecule 1 flag
0
Mm Hs SEC23B 0.02 0 0 0.024 0 3 Airway goblet cells Mesoderm Lungs CDA-II,CDAII,HEMPAS,CDAN2 Sec23 homolog B, coat complex II component Yflag
0
Mm Hs MUC4 0.005 0 0 0.017 0.003 3 Airway goblet cells Mesoderm Lungs mucin 4, cell surface associated flag
0
Mm Hs QSOX1 0.029 0 0.375 0.044 0.026 1 Airway goblet cells Mesoderm Lungs QSCN6 quiescin sulfhydryl oxidase 1 flag
0
Mm Hs SCGB3A1 0.006 0 0 0.012 0 3 Airway goblet cells Mesoderm Lungs UGRP2,HIN-1,HIN1,LU105,PnSP-2 secretoglobin family 3A member 1 flag
0
Mm Hs MUC20 0 0 0 0 0 1 Airway goblet cells Mesoderm Lungs FLJ14408,KIAA1359 mucin 20, cell surface associated flag
0
Mm Hs TFF2 0.002 0 0 0 0 4 Airway goblet cells Mesoderm Lungs SML1 trefoil factor 2 flag
0
Mm Hs PIGR 0.031 0 0.5 0.044 0.029 5 Airway goblet cells Mesoderm Lungs polymeric immunoglobulin receptor Yflag
0
Mm Hs GP2 0.001 0 0.5 0.001 0.001 2 Airway goblet cells Mesoderm Lungs ZAP75 glycoprotein 2 flag
0
Mm Hs AGR2 0.024 0 0.625 0.073 0.012 7 Airway goblet cells Mesoderm Lungs XAG-2,HAG-2,PDIA17 anterior gradient 2, protein disulphide isomerase family member flag
0
Mm Hs MSLN 0.004 0 0.5 0.001 0.005 2 Airway goblet cells Mesoderm Lungs MPF mesothelin flag
0
Mm DCPP2 0.001 0 1 0 0 1 Airway goblet cells Mesoderm Lungs demilune cell and parotid protein 2 flag
0
Mm Hs LIPF 0.001 0 1 0 0 1 Airway goblet cells Mesoderm Lungs lipase F, gastric type flag
0
Mm DCPP3 0.001 0 1 0 0 1 Airway goblet cells Mesoderm Lungs demilune cell and parotid protein 3 flag
0
Mm WFDC18 0.007 NA NA NA NA 2 Airway goblet cells Mesoderm Lungs WAP four-disulfide core domain 18 flag
0
Mm Hs SPDEF 0.004 0 0 0.01 0 2 Airway goblet cells Mesoderm Lungs PDEF,bA375E1.3 SAM pointed domain containing ETS transcription factor flag
-1
Mm CBR2 0.027 0 0.625 0 0.033 3 Airway goblet cells Mesoderm Lungs carbonyl reductase 2 flag
-1
Mm Hs AQP5 0.018 0 0.625 0.042 0.014 4 Airway goblet cells Mesoderm Lungs aquaporin 5 Yflag
-1
Mm Hs DMBT1 0.01 0 0.5 0.003 0.011 3 Airway goblet cells Mesoderm Lungs GP340,muclin,SALSA,Gp-340,hensin,vomeroglandin deleted in malignant brain tumors 1 flag
-1
Mm DCPP1 0.001 0 0.875 0 0.001 1 Airway goblet cells Mesoderm Lungs demilune cell and parotid protein 1 flag
-4
Mm Hs FXYD3 0.043 0 0.625 0.126 0.024 1 Airway goblet cells Mesoderm Lungs MAT-8,PLML FXYD domain containing ion transport regulator 3 flag

Datasets with computationally identified Airway goblet cells

SRA SRS tissue cluster cell type p-value FDR View
SRA653146 SRS3044262 Trachea 20 Airway goblet cells 1.10E-23 5.47E-20 view data
SRA665153 SRS3030316 Airway submucosal glandular epithelial cells 0 Airway goblet cells 1.40E-24 1.37E-21 view data
SRA665153 SRS3030316 Airway submucosal glandular epithelial cells 1 Airway goblet cells 4.71E-22 3.05E-19 view data
SRA665153 SRS3030316 Airway submucosal glandular epithelial cells 2 Airway goblet cells 7.13E-11 2.32E-8 view data
SRA665153 SRS3030316 Airway submucosal glandular epithelial cells 4 Airway goblet cells 2.52E-6 3.78E-4 view data
SRA665153 SRS3030316 Airway submucosal glandular epithelial cells 5 Airway goblet cells 4.81E-7 9.24E-5 view data
SRA665153 SRS3030316 Airway submucosal glandular epithelial cells 6 Airway goblet cells 3.32E-5 3.59E-3 view data
SRA665153 SRS3030316 Airway submucosal glandular epithelial cells 8 Airway goblet cells 2.76E-21 1.34E-18 view data