Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Gene expression markers for Ciliated cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
6
Mm Hs FOXJ1 0.01 0 0.667 0.009 0.011 2 Ciliated cells Endoderm Lungs HFH-4,HFH4,FKHL13 forkhead box J1 flag
0
Mm Hs CCDC17 0.001 0 0.667 0.002 0.001 1 Ciliated cells Endoderm Lungs FLJ33084 coiled-coil domain containing 17 flag
0
Mm Hs TUBB4B 0.276 0 0 0.338 0 1 Ciliated cells Endoderm Lungs Beta2,TUBB2C tubulin beta 4B class IVb flag
0
Mm Hs APPL2 0.011 0 0.333 0.006 0.013 2 Ciliated cells Endoderm Lungs FLJ10659,DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 flag
0
Mm Hs SCGB1A1 0.028 0 0 0.011 0 4 Ciliated cells Endoderm Lungs CC10,CCSP,CC16,UGB secretoglobin family 1A member 1 Yflag
0
Mm Hs LRRC23 0.008 0 0 0.01 0.008 2 Ciliated cells Endoderm Lungs B7,LRPB7 leucine rich repeat containing 23 flag
0
Mm Hs CYP2S1 0.004 0 1 0.006 0.004 1 Ciliated cells Endoderm Lungs cytochrome P450 family 2 subfamily S member 1 flag
0
Mm FAM177A 0 0 0 0 0 1 Ciliated cells Endoderm Lungs family with sequence similarity 177, member A flag
0
Mm Hs CCDC39 0.007 0 1 0.016 0.005 1 Ciliated cells Endoderm Lungs DKFZp434A128,CILD14,FAP59 coiled-coil domain containing 39 Yflag
0
Mm Hs SEC14L3 0.006 0 0 0 0 3 Ciliated cells Endoderm Lungs TAP2 SEC14 like lipid binding 3 flag
0
Mm CES1D 0.016 0 1 0 0.02 2 Ciliated cells Endoderm Lungs carboxylesterase 1D flag
0
Mm Hs CCDC181 0.013 0 0.667 0.03 0.01 1 Ciliated cells Endoderm Lungs FLJ25846,C1orf114 coiled-coil domain containing 181 flag
0
Mm Hs USMG5 0.022 0 0 0.023 0 2 Ciliated cells Endoderm Lungs upregulated during skeletal muscle growth 5 flag
0
Mm Hs TMEM212 0.006 0 0 0 0 2 Ciliated cells Endoderm Lungs FLJ23172 transmembrane protein 212 flag
0
Mm Hs FAM161A 0.009 0 1 0.019 0.007 1 Ciliated cells Endoderm Lungs FLJ13305,RP28 FAM161A, centrosomal protein Yflag
0
Mm DYNLT1C 0.008 0 0 0 0.011 2 Ciliated cells Endoderm Lungs dynein light chain Tctex-type 1C flag
0
Mm Hs CCDC153 0.006 0 1 0.002 0.008 2 Ciliated cells Endoderm Lungs LOC283152 coiled-coil domain containing 153 flag
-1
Mm Hs ODF3B 0.009 0 0.667 0.022 0.007 2 Ciliated cells Endoderm Lungs outer dense fiber of sperm tails 3B flag

Datasets with computationally identified Ciliated cells

SRA SRS tissue cluster cell type p-value FDR View
SRA832392 SRS4237528 Lung 5 Ciliated cells 2.09E-19 7.29E-17 view data
SRA832392 SRS4237531 Lung 3 Ciliated cells 2.78E-11 5.97E-9 view data
SRA807566 SRS4031561 Lung 11 Ciliated cells 9.21E-14 4.24E-11 view data