Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: Cells of the Pineal gland.

Gene expression markers for Pinealocytes

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
1
Mm Hs SAG 0.005 0 0 0.002 0 3 Pinealocytes Ectoderm Brain ARRESTIN,RP47 S-antigen visual arrestin Yflag
1
Mm Hs GNGT2 0.054 0 0 0 0.066 2 Pinealocytes Ectoderm Brain GNG9 G protein subunit gamma transducin 2 flag
1
Mm Hs ROM1 0.007 0 0 0 0 2 Pinealocytes Ectoderm Brain TSPAN23,ROM retinal outer segment membrane protein 1 Yflag
0
Mm Hs ADRA1B 0.002 0 0 0 0.003 1 Pinealocytes Ectoderm Brain adrenoceptor alpha 1B flag
0
Mm Hs PMEPA1 0.048 0 0 0.025 0.054 2 Pinealocytes Ectoderm Brain STAG1,TMEPAI prostate transmembrane protein, androgen induced 1 flag
0
Mm Hs PDE10A 0.024 0 0 0.003 0.03 2 Pinealocytes Ectoderm Brain phosphodiesterase 10A Yflag
0
Mm Hs CREM 0.065 0 0 0.158 0.043 3 Pinealocytes Ectoderm Brain hCREM-2 cAMP responsive element modulator flag
0
Mm Hs AANAT 0 0 0 0 0 2 Pinealocytes Ectoderm Brain SNAT aralkylamine N-acetyltransferase Yflag
0
Mm Hs GNG13 0.006 0 0 0 0.008 5 Pinealocytes Ectoderm Brain h2-35,G(gamma)13 G protein subunit gamma 13 flag
0
Mm Hs CACNA1F 0 0 0 0 0 1 Pinealocytes Ectoderm Brain Cav1.4,JM8,JMC8,CSNBX2,CORDX3,CSNB2A,OA2,CSNB2,AIED calcium voltage-gated channel subunit alpha1 F Yflag
0
Mm Hs PDE6B 0.002 0 1 0.001 0.002 2 Pinealocytes Ectoderm Brain CSNB3,rd1,RP40,CSNBAD2,PDEB phosphodiesterase 6B Yflag
0
Mm Hs NEUROD1 0.038 0 1 0.023 0.043 8 Pinealocytes Ectoderm Brain BETA2,BHF-1,NeuroD,bHLHa3,MODY6,NEUROD neuronal differentiation 1 Yflag
0
Mm Hs CHRNB4 0.001 0 0 0.001 0.001 1 Pinealocytes Ectoderm Brain cholinergic receptor nicotinic beta 4 subunit flag
0
Mm Hs CHRNA3 0.004 0 0 0 0.004 2 Pinealocytes Ectoderm Brain cholinergic receptor nicotinic alpha 3 subunit Yflag
0
Mm Hs DRD4 0.001 0 1 0 0.001 1 Pinealocytes Ectoderm Brain dopamine receptor D4 Yflag
0
Mm Hs ASMT 0 0 0 0 0 1 Pinealocytes Ectoderm Brain HIOMT,ASMTY,HIOMTY acetylserotonin O-methyltransferase flag
0
Mm Hs SLC6A6 0.102 0 0 0.001 0 2 Pinealocytes Ectoderm Brain TAUT solute carrier family 6 member 6 flag
0
Mm Hs PDE6C 0 0 0 0 0.001 1 Pinealocytes Ectoderm Brain PDEA2,ACHM5,COD4 phosphodiesterase 6C Yflag
0
Mm Hs CNGA1 0.002 0 1 0 0.002 1 Pinealocytes Ectoderm Brain RCNC1,RCNCa,CNG1,RP49,CNCG1,CNCG cyclic nucleotide gated channel alpha 1 Yflag
0
Mm Hs CNGB1 0.001 0 1 0 0.001 2 Pinealocytes Ectoderm Brain RCNC2,RCNCb,GAR1,CNGB1B,RP45,CNCG2,CNCG3L cyclic nucleotide gated channel beta 1 Yflag
0
Mm Hs CRX 0.002 0 1 0 0.003 2 Pinealocytes Ectoderm Brain LCA7,CORD2 cone-rod homeobox Yflag
0
Mm Hs GNGT1 0.007 0 1 0 0.009 1 Pinealocytes Ectoderm Brain GNG1 G protein subunit gamma transducin 1 flag
0
Mm Hs TPH1 0.002 0 0 0.001 0 4 Pinealocytes Ectoderm Brain TPRH,TPH tryptophan hydroxylase 1 flag
0
Mm Hs ADRB1 0.002 0 0 0.002 0.002 2 Pinealocytes Ectoderm Brain ADRB1R adrenoceptor beta 1 Yflag

Datasets with computationally identified Pinealocytes

SRA SRS tissue cluster cell type p-value FDR View
SRA203368 SRS866908 Retina 2 Pinealocytes 8.03E-16 2.62E-13 view data
SRA203368 SRS866908 Retina 7 Pinealocytes 1.95E-14 5.08E-12 view data
SRA203368 SRS866909 Retina 3 Pinealocytes 1.57E-14 4.59E-12 view data
SRA203368 SRS866907 Retina 0 Pinealocytes 8.17E-14 2.27E-11 view data
SRA203368 SRS866907 Retina 17 Pinealocytes 7.85E-14 2.27E-11 view data
SRA203368 SRS866912 Retina 0 Pinealocytes 2.78E-14 7.00E-12 view data
SRA203368 SRS866912 Retina 9 Pinealocytes 1.87E-14 4.97E-12 view data