Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: Podocytes are cells in the Bowman's capsule in the kidneys that wrap around capillaries of the glomerulus, preventing plasma proteins from entering the urinary ultrafiltrate by providing a barrier comprising filtration slits between foot processes, which in aggregate represent a dynamic network of cellular extensions.

Gene expression markers for Podocytes

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
5
Mm Hs NPHS1 0.002 0.955 0.889 0 0 2 Podocytes Mesoderm Kidney CNF,NPHN NPHS1, nephrin Yflag
2
Mm Hs BCAM 0.049 0.955 0.111 0.046 0.049 1 Podocytes Mesoderm Kidney CD239,LU basal cell adhesion molecule (Lutheran blood group) Yflag
2
Mm Hs NPHS2 0.002 1 0.889 0 0 1 Podocytes Mesoderm Kidney SRN1,PDCN NPHS2, podocin Yflag
2
Mm Hs PODXL 0.04 1 0.944 0.034 0.039 4 Podocytes Mesoderm Kidney PCLP,Gp200,PC podocalyxin like Yflag
2
Mm Hs TCF21 0.014 0.864 0 0 0 5 Podocytes Mesoderm Kidney POD1,bHLHa23 transcription factor 21 flag
1
Mm Hs AIF1L 0.01 0.864 0.278 0.016 0.006 2 Podocytes Mesoderm Kidney IBA2,FLJ12783,C9orf58 allograft inflammatory factor 1 like flag
1
Mm Hs ARHGAP24 0.005 0 0.944 0.001 0.006 1 Podocytes Mesoderm Kidney DKFZP564B1162,FLJ33877,FilGAP Rho GTPase activating protein 24 flag
1
Mm Hs DPP4 0.02 0 0.889 0.013 0.02 9 Podocytes Mesoderm Kidney CD26,ADCP2 dipeptidyl peptidase 4 flag
1
Mm Hs COL4A4 0.007 0.182 0.833 0.001 0.007 4 Podocytes Mesoderm Kidney CA44 collagen type IV alpha 4 chain Yflag
1
Mm Hs COL4A3 0.006 0.045 0.944 0 0.006 4 Podocytes Mesoderm Kidney collagen type IV alpha 3 chain Yflag
1
Mm Hs KANK1 0.027 0 0.167 0.008 0.032 1 Podocytes Mesoderm Kidney KANK,ANKRD15 KN motif and ankyrin repeat domains 1 Yflag
1
Mm Hs NPR3 0.005 0 0.722 0.007 0.004 1 Podocytes Mesoderm Kidney FLJ14054,NPRC,ANPRC,C5orf23 natriuretic peptide receptor 3 flag
1
Mm Hs DACH1 0.013 0.909 0.222 0.021 0.011 3 Podocytes Mesoderm Kidney DACH dachshund family transcription factor 1 flag
1
Mm Hs MERTK 0.016 0 0.722 0.001 0.019 3 Podocytes Mesoderm Kidney mer,RP38,c-Eyk,Tyro12 MER proto-oncogene, tyrosine kinase Yflag
1
Mm Hs CTNNAL1 0.028 0.227 0.167 0.091 0.009 2 Podocytes Mesoderm Kidney CLLP,alpha-CATU catenin alpha like 1 flag
1
Mm Hs ADM 0.026 0.273 0.444 0.062 0.017 5 Podocytes Mesoderm Kidney AM adrenomedullin flag
1
Mm Hs TRIB2 0.03 0.636 0 0.01 0 1 Podocytes Mesoderm Kidney GS3955 tribbles pseudokinase 2 flag
1
Mm Hs NEBL 0.035 0.409 0.111 0.013 0.04 1 Podocytes Mesoderm Kidney LASP2,LNEBL nebulette flag
1
Mm Hs FAT1 0.028 0.227 0.111 0.025 0.029 1 Podocytes Mesoderm Kidney CDHF7,CDHR8 FAT atypical cadherin 1 flag
1
Mm Hs PTH1R 0.019 0.682 0.833 0 0.022 5 Podocytes Mesoderm Kidney PTHR1 parathyroid hormone 1 receptor Yflag
1
Mm Hs IQGAP2 0.037 0.409 0.444 0.057 0.032 1 Podocytes Mesoderm Kidney IQ motif containing GTPase activating protein 2 flag
1
Mm Hs CTGF 0.028 0.864 0.278 0.094 0.012 11 Podocytes Mesoderm Kidney IGFBP8,CCN2 connective tissue growth factor flag
1
Mm Hs CDKN1C 0.097 0.318 0.889 0.045 0.108 3 Podocytes Mesoderm Kidney P57,BWCR,BWS cyclin dependent kinase inhibitor 1C Yflag
1
Mm QK 0.268 0 0.778 0 0.334 1 Podocytes Mesoderm Kidney quaking flag
1
Mm Hs CLIC5 0.016 1 0.944 0.007 0.016 2 Podocytes Mesoderm Kidney DFNB102 chloride intracellular channel 5 Yflag
1
Mm Hs GOLIM4 0.056 1 0.944 0.075 0.047 1 Podocytes Mesoderm Kidney GPP130,GIMPC,P138,GOLPH4 golgi integral membrane protein 4 flag
1
Mm Hs CD2AP 0.068 0.455 0.944 0.028 0.077 1 Podocytes Mesoderm Kidney CMS CD2 associated protein Yflag
1
Mm Hs ETF1 0.137 0 0.278 0.113 0.137 1 Podocytes Mesoderm Kidney eRF1,TB3-1,SUP45L1,ERF eukaryotic translation termination factor 1 flag
1
Mm Hs EMC7 0.224 0.364 0.111 0.153 0.238 1 Podocytes Mesoderm Kidney C15orf24 ER membrane protein complex subunit 7 flag
1
Mm Hs LUC7L2 0.367 0.091 0.278 0.064 0.441 1 Podocytes Mesoderm Kidney CGI-74,CGI-59,H_NH0792N18.3,FLJ10657,LUC7B2,hLuc7B2 LUC7 like 2, pre-mRNA splicing factor flag
1
Mm Hs MAPT 0.198 0 0.5 0.018 0.244 1 Podocytes Mesoderm Kidney MTBT1,tau,PPND,FTDP-17,TAU,MSTD,MTBT2,FLJ31424,MGC138549,PPP1R103,DDPAC,MAPTL microtubule associated protein tau Yflag
1
Mm Hs MAFB 0.053 1 0.833 0.053 0.052 6 Podocytes Mesoderm Kidney KRML MAF bZIP transcription factor B Yflag
0
Mm Hs FOXD1 0.002 0 0.056 0 0.002 1 Podocytes Mesoderm Kidney FREAC4,FKHL8 forkhead box D1 flag
0
Mm Hs ZFP91 0.083 0 0 0.021 0 1 Podocytes Mesoderm Kidney PZF,ZNF757 ZFP91 zinc finger protein flag
0
Mm Hs EHD4 0.066 0 0.167 0.027 0.075 1 Podocytes Mesoderm Kidney PAST4 EH domain containing 4 flag
0
Mm Hs LOXL2 0.021 0 0.167 0.017 0.021 2 Podocytes Mesoderm Kidney WS9-14,LOR lysyl oxidase like 2 flag
0
Mm Hs FOXC1 0.015 0.091 0.111 0.007 0.017 3 Podocytes Mesoderm Kidney FREAC3,IGDA,IHG1,FKHL7,IRID1 forkhead box C1 Yflag
0
Mm Hs EMC2 0.065 0 0.167 0.051 0.068 1 Podocytes Mesoderm Kidney KIAA0103,TTC35 ER membrane protein complex subunit 2 flag
0
Mm Hs PLEKHH2 0.003 0 0.111 0.006 0.002 2 Podocytes Mesoderm Kidney KIAA2028,PLEKHH1L pleckstrin homology, MyTH4 and FERM domain containing H2 flag
0
Mm Hs WSB2 0.005 0 0 0.007 0 1 Podocytes Mesoderm Kidney SBA2,MGC10210 WD repeat and SOCS box containing 2 flag
0
Mm Hs SULF1 0.013 0 0 0.018 0 4 Podocytes Mesoderm Kidney KIAA1077,SULF-1,hSulf-1 sulfatase 1 flag
0
Mm Hs TOB1 0.128 0.5 0 0.341 0 1 Podocytes Mesoderm Kidney TOB,TROB,TROB1 transducer of ERBB2, 1 flag
0
Mm Hs ZBTB8A 0.001 0 0 0 0 1 Podocytes Mesoderm Kidney BOZF1,FLJ90065,ZNF916A,ZBTB8 zinc finger and BTB domain containing 8A flag
0
Mm Hs HSPB8 0.024 0 0 0.006 0.028 2 Podocytes Mesoderm Kidney H11,E2IG1,HSP22,HspB8,CMT2L heat shock protein family B (small) member 8 Yflag
0
Mm Hs ADCY1 0.017 0 0.056 0.001 0.02 2 Podocytes Mesoderm Kidney AC1,DFNB44 adenylate cyclase 1 Yflag
0
Mm Hs DOCK5 0.009 0.045 0 0.037 0.002 2 Podocytes Mesoderm Kidney FLJ21034 dedicator of cytokinesis 5 flag
0
Mm Hs CRB2 0.001 0 0.056 0 0.001 1 Podocytes Mesoderm Kidney FLJ38464,FLJ16786 crumbs 2, cell polarity complex component Yflag
0
Mm Hs LRRC49 0.012 0 0.056 0.016 0.012 1 Podocytes Mesoderm Kidney FLJ20156 leucine rich repeat containing 49 flag
0
Mm Hs AJUBA 0.008 0.091 0.056 0.008 0.008 1 Podocytes Mesoderm Kidney MGC15563,JUB ajuba LIM protein flag
0
Mm Hs CORO2B 0.018 0 0.056 0 0.023 1 Podocytes Mesoderm Kidney ClipinC,KIAA0925 coronin 2B flag
0
Mm Hs DOCK1 0.01 0 0.056 0.002 0.013 2 Podocytes Mesoderm Kidney DOCK180,ced5 dedicator of cytokinesis 1 flag
0
Mm Hs SEMA3E 0.005 0 0 0 0 4 Podocytes Mesoderm Kidney M-SemaK,KIAA0331,coll-5,SEMAH semaphorin 3E Yflag
0
Mm Hs GPRC5A 0.024 0 0.056 0.084 0.01 2 Podocytes Mesoderm Kidney RAIG1,PEIG-1,RAI3 G protein-coupled receptor class C group 5 member A flag
0
Mm Hs EPB41L5 0.011 0.045 0.111 0.018 0.01 1 Podocytes Mesoderm Kidney KIAA1548,FLJ12957,BE37,YMO1,YRT erythrocyte membrane protein band 4.1 like 5 flag
0
Mm Hs MET 0.006 0 0.056 0.016 0.005 3 Podocytes Mesoderm Kidney HGFR,RCCP2,DFNB97 MET proto-oncogene, receptor tyrosine kinase Yflag
0
Mm Hs CD80 0 0 0 0 0 7 Podocytes Mesoderm Kidney B7.1,B7-1,CD28LG,CD28LG1 CD80 molecule flag
0
Mm Hs TDRD5 0.002 0 0 0.002 0 1 Podocytes Mesoderm Kidney FLJ34823,TUDOR3 tudor domain containing 5 flag
0
Mm Hs RAB3B 0.023 0 0 0.019 0 4 Podocytes Mesoderm Kidney RAB3B, member RAS oncogene family flag
0
Mm Hs THSD7A 0.016 0.909 0 0.014 0 2 Podocytes Mesoderm Kidney KIAA0960 thrombospondin type 1 domain containing 7A flag
0
Mm Hs SEMA3G 0.003 0 0 0.002 0 1 Podocytes Mesoderm Kidney FLJ00014,sem2 semaphorin 3G flag
0
Mm Hs CDH13 0.026 0 0 0.025 0.027 1 Podocytes Mesoderm Kidney CDHH cadherin 13 flag
0
Mm Hs MYOC 0.003 0 0 0.002 0.004 1 Podocytes Mesoderm Kidney TIGR,JOAG1,GLC1A myocilin Yflag
0
Mm Hs LMX1B 0.001 0 0.056 0 0.001 2 Podocytes Mesoderm Kidney NPS1 LIM homeobox transcription factor 1 beta Yflag
0
Mm Hs PTPRO 0.011 1 0.5 0.001 0.012 2 Podocytes Mesoderm Kidney PTPU2,GLEPP1,PTP-U2,PTP-oc,NPHS6 protein tyrosine phosphatase, receptor type O Yflag
0
Mm Hs DES 0.021 0 0 0.009 0.023 11 Podocytes Mesoderm Kidney CMD1I,CSM1,CSM2 desmin Yflag
0
Mm Hs ANGPTL2 0.013 0 0.056 0.006 0.015 4 Podocytes Mesoderm Kidney angiopoietin like 2 flag
0
Mm Hs WT1 0.01 1 0 0.016 0 10 Podocytes Mesoderm Kidney WIT-2,AWT1,NPHS4,GUD Wilms tumor 1 Yflag
0
Mm Hs FOXC2 0.003 0.409 0.056 0.005 0.002 3 Podocytes Mesoderm Kidney MFH-1,FKHL14 forkhead box C2 Yflag
0
Mm Hs LAMA3 0.005 0 0 0.011 0.004 1 Podocytes Mesoderm Kidney nicein-150kDa,kalinin-165kDa,BM600-150kDa,epiligrin,LAMNA laminin subunit alpha 3 Yflag
0
Mm Hs SYNPO 0.009 0.545 0 0.006 0 2 Podocytes Mesoderm Kidney KIAA1029 synaptopodin flag
0
Mm Hs NLRP3 0.004 0 0 0.001 0.005 3 Podocytes Mesoderm Kidney AGTAVPRL,AII,AVP,FCAS,FCU,NALP3,PYPAF1,MWS,CLR1.1,C1orf7,CIAS1 NLR family pyrin domain containing 3 Yflag
0
Mm Hs SLC2A4 0.001 0 0 0.003 0 3 Podocytes Mesoderm Kidney GLUT4 solute carrier family 2 member 4 Yflag
0
Mm Hs VEGFA 0.021 0.727 0 0.02 0 10 Podocytes Mesoderm Kidney VEGF-A,VPF,VEGF vascular endothelial growth factor A Yflag
0
Mm Hs LCN2 0.043 0 0 0.057 0.042 9 Podocytes Mesoderm Kidney NGAL,24p3 lipocalin 2 flag
0
Mm Hs ADAMTS13 0 0 0 0 0 2 Podocytes Mesoderm Kidney VWFCP,vWF-CP,FLJ42993,MGC118899,MGC118900,DKFZp434C2322,C9orf8 ADAM metallopeptidase with thrombospondin type 1 motif 13 Yflag
0
Mm Hs RHPN1 0.002 0 0 0.001 0 1 Podocytes Mesoderm Kidney KIAA1929,RHPN,ODF5 rhophilin Rho GTPase binding protein 1 flag
0
Mm Hs SH2D4A 0.007 0 0 0.009 0 1 Podocytes Mesoderm Kidney FLJ20967,SH2A,PPP1R38 SH2 domain containing 4A flag
0
Mm Hs MYO1E 0.015 0 0.111 0.011 0.016 1 Podocytes Mesoderm Kidney MYO1C,HuncM-IC,MGC104638 myosin IE Yflag
0
Mm Hs PARD3B 0.002 0.318 0.5 0.003 0.001 1 Podocytes Mesoderm Kidney Par3L,PAR3beta,ALS2CR19 par-3 family cell polarity regulator beta flag
0
Mm Hs OPTN 0.025 0 0 0.094 0.01 3 Podocytes Mesoderm Kidney FIP2,HYPL,FIP-2,TFIIIA-INTP,HIP7,GLC1E optineurin Yflag
0
Mm Hs TNS2 0.007 0 0 0.003 0 2 Podocytes Mesoderm Kidney KIAA1075,C1-TEN,TENC1 tensin 2 flag
0
Mm Hs MYO1D 0.01 0 0.056 0.018 0.008 3 Podocytes Mesoderm Kidney KIAA0727,myr4,PPP1R108 myosin ID flag
0
Mm Hs PROS1 0.024 0 0.056 0.004 0.029 2 Podocytes Mesoderm Kidney PROS protein S Yflag
0
Mm Hs PLCE1 0.005 0.364 0.111 0.006 0.004 3 Podocytes Mesoderm Kidney KIAA1516,NPHS3 phospholipase C epsilon 1 Yflag
0
Mm Hs ITGA3 0.012 0.182 0.111 0.019 0.009 3 Podocytes Mesoderm Kidney CD49c,VLA3a,VCA-2,GAP-B3,MSK18 integrin subunit alpha 3 Yflag
0
Mm Hs LAMB2 0.019 0.045 0.056 0.013 0.021 4 Podocytes Mesoderm Kidney NPHS5,LAMS laminin subunit beta 2 Yflag
0
Mm Hs SRGAP1 0.025 0.955 0 0.074 0 2 Podocytes Mesoderm Kidney KIAA1304,ARHGAP13 SLIT-ROBO Rho GTPase activating protein 1 flag
0
Mm Hs PLOD2 0.019 0.545 0.278 0.035 0.013 1 Podocytes Mesoderm Kidney LH2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 Yflag
0
Mm Hs NPR1 0.009 0.182 0 0.001 0.011 4 Podocytes Mesoderm Kidney GUCY2A,ANPa,ANPRA,NPRA natriuretic peptide receptor 1 flag
0
Mm Hs EFNB1 0.031 0.864 0.222 0.015 0.035 1 Podocytes Mesoderm Kidney LERK2,Elk-L,EPLG2,CFNS ephrin B1 Yflag
0
Mm Hs MAGI2 0.006 0.909 0.056 0.015 0.003 1 Podocytes Mesoderm Kidney ACVRIP1,MAGI-2 membrane associated guanylate kinase, WW and PDZ domain containing 2 flag
0
Mm Hs ITGB5 0.047 0 0.333 0.015 0.055 4 Podocytes Mesoderm Kidney integrin subunit beta 5 flag
-1
Mm Hs COL4A5 0.009 0.091 0.056 0.016 0.007 1 Podocytes Mesoderm Kidney ASLN,ATS collagen type IV alpha 5 chain Yflag
-1
Mm Hs ENPEP 0.011 0.682 0.944 0.002 0.011 2 Podocytes Mesoderm Kidney gp160,CD249 glutamyl aminopeptidase flag
-1
Mm Hs ILDR2 0.018 0 0.611 0.001 0.022 2 Podocytes Mesoderm Kidney C1orf32 immunoglobulin like domain containing receptor 2 flag

Datasets with computationally identified Podocytes

SRA SRS tissue cluster cell type p-value FDR View
SRA662115 SRS2998546 Kidney 0 Podocytes 1.55E-32 1.03E-29 view data
SRA662115 SRS2998546 Kidney 1 Podocytes 6.75E-24 1.76E-21 view data
SRA662115 SRS2998546 Kidney 2 Podocytes 7.75E-29 2.70E-26 view data
SRA650215 SRS2853842 Fetal kidney 5 Podocytes 1.45E-5 1.29E-2 view data
SRA678017 SRS3112006 Embryonic kidney cortex 12 Podocytes 1.03E-5 6.11E-3 view data
SRA652805 SRS2870735 Kidney organoids 1 Podocytes 1.17E-5 5.71E-3 view data
SRA652805 SRS2870735 Kidney organoids 8 Podocytes 6.99E-11 6.80E-8 view data
SRA709816 SRS3331834 ES-derived kidney organoid 11 Podocytes 1.13E-11 2.62E-8 view data
SRA709816 SRS3331832 ES-derived kidney organoid 4 Podocytes 2.63E-16 8.44E-13 view data
SRA650986 SRS2859161 Embryonic kidney 10 Podocytes 1.11E-10 2.78E-7 view data
SRA705190 SRS4139634 Embryonic kidney 0 Podocytes 3.95E-16 2.82E-13 view data
SRA705190 SRS4139634 Embryonic kidney 1 Podocytes 1.67E-18 2.92E-15 view data
SRA705190 SRS4139634 Embryonic kidney 3 Podocytes 2.05E-18 2.92E-15 view data
SRA705190 SRS4139634 Embryonic kidney 4 Podocytes 8.56E-17 8.13E-14 view data
SRA705190 SRS4139634 Embryonic kidney 5 Podocytes 4.72E-11 2.69E-8 view data
SRA757817 SRS3666495 Embryonic kidney 16 Podocytes 6.48E-27 2.08E-23 view data
SRA662115 SRS2998544 Kidney 0 Podocytes 4.18E-31 5.06E-28 view data
SRA662115 SRS2998544 Kidney 1 Podocytes 1.30E-18 3.92E-16 view data
SRA662115 SRS2998544 Kidney 2 Podocytes 4.64E-22 1.87E-19 view data
SRA653146 SRS3044249 Kidney 16 Podocytes 5.63E-5 6.76E-3 view data
SRA662115 SRS2998547 Kidney 0 Podocytes 1.16E-31 8.04E-29 view data
SRA662115 SRS2998547 Kidney 1 Podocytes 4.19E-31 1.93E-28 view data
SRA662115 SRS2998547 Kidney 2 Podocytes 6.27E-23 2.17E-20 view data
SRA662115 SRS2998547 Kidney 5 Podocytes 3.27E-17 7.55E-15 view data
SRA652805 SRS2870733 Kidney organoids 6 Podocytes 5.69E-12 1.01E-8 view data
SRA705190 SRS4139633 Embryonic kidney 1 Podocytes 2.63E-22 6.09E-19 view data
SRA705190 SRS4139633 Embryonic kidney 3 Podocytes 6.33E-21 7.33E-18 view data
SRA705190 SRS4139633 Embryonic kidney 6 Podocytes 2.91E-8 1.69E-5 view data
SRA709816 SRS3331831 ES-derived kidney organoid 6 Podocytes 7.64E-15 2.04E-11 view data
SRA709816 SRS3331831 ES-derived kidney organoid 10 Podocytes 4.04E-14 5.39E-11 view data
SRA709816 SRS3331833 ES-derived kidney organoid 3 Podocytes 1.36E-16 3.63E-13 view data
SRA678017 SRS3112005 Embryonic kidney cortex 10 Podocytes 6.28E-8 5.22E-5 view data
SRA662115 SRS2998545 Kidney 0 Podocytes 3.94E-37 5.51E-34 view data
SRA662115 SRS2998545 Kidney 1 Podocytes 8.10E-22 2.83E-19 view data
SRA662115 SRS2998545 Kidney 3 Podocytes 1.08E-31 5.03E-29 view data
SRA662115 SRS2998545 Kidney 6 Podocytes 1.43E-4 2.00E-2 view data
SRA705190 SRS3306242 Embryonic kidney 4 Podocytes 9.45E-16 1.93E-12 view data
SRA705190 SRS3306242 Embryonic kidney 5 Podocytes 3.39E-9 4.63E-6 view data
SRA705190 SRS4139635 Embryonic kidney 0 Podocytes 6.15E-16 5.47E-13 view data
SRA705190 SRS4139635 Embryonic kidney 2 Podocytes 2.17E-9 1.16E-6 view data
SRA705190 SRS4139635 Embryonic kidney 4 Podocytes 2.49E-17 3.33E-14 view data
SRA705190 SRS4139635 Embryonic kidney 11 Podocytes 8.98E-20 2.40E-16 view data
SRA635314 SRS2727269 Whole kidney 19 Podocytes 3.59E-19 2.52E-16 view data