Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: A naive B cell is a B cell that has not been exposed to an antigen.

Gene expression markers for B cells naive

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm Hs P2RX5 0 NA NA 0.002 NA 5 B cells naive Mesoderm Immune system P2X5 purinergic receptor P2X 5 flag
0
Mm Hs SIK1 0.029 NA NA NA NA 3 B cells naive Mesoderm Immune system msk,SNF1LK salt inducible kinase 1 Yflag
0
Mm Hs SELL 0.035 0.533 NA 0.058 NA 6 B cells naive Mesoderm Immune system LSEL,LAM1,LAM-1,hLHRc,Leu-8,Lyam-1,PLNHR,CD62L,LYAM1,LNHR selectin L flag
0
Mm Hs RASGRP2 0.066 0.067 NA 0.024 NA 3 B cells naive Mesoderm Immune system CALDAG-GEFI RAS guanyl releasing protein 2 Yflag
0
Mm Hs RALGPS2 0.048 NA NA 0.023 NA 4 B cells naive Mesoderm Immune system FLJ10244,FLJ25604 Ral GEF with PH domain and SH3 binding motif 2 flag
0
Mm Hs PTPRCAP 0.072 NA NA NA 0.087 4 B cells naive Mesoderm Immune system CD45-AP protein tyrosine phosphatase, receptor type C associated protein flag
0
Hs PSG2 0 NA NA NA NA 1 B cells naive Mesoderm Immune system PSGGB,PSG1,PSBG2 pregnancy specific beta-1-glycoprotein 2 flag
0
Mm Hs PNOC 0.009 NA NA 0.001 0.01 5 B cells naive Mesoderm Immune system PPNOC,N/OFQ,NOP prepronociceptin flag
0
Mm Hs P2RY14 0.012 NA NA 0.003 0.014 3 B cells naive Mesoderm Immune system KIAA0001,GPR105 purinergic receptor P2Y14 flag
0
Mm Hs SLC12A1 0.001 NA NA 0.001 NA 3 B cells naive Mesoderm Immune system NKCC2 solute carrier family 12 member 1 Yflag
0
Mm Hs NMBR 0 NA NA NA NA 2 B cells naive Mesoderm Immune system BB1R neuromedin B receptor flag
0
Mm Hs MS4A1 0.014 1 NA 0.016 0.012 4 B cells naive Mesoderm Immune system Bp35,MS4A2,CD20 membrane spanning 4-domains A1 Yflag
0
Mm Hs MICAL3 0.02 NA NA 0.01 0.022 1 B cells naive Mesoderm Immune system KIAA0819 microtubule associated monooxygenase, calponin and LIM domain containing 3 flag
0
Mm Hs MEP1A 0.004 NA NA 0.001 0.006 2 B cells naive Mesoderm Immune system PPHA meprin A subunit alpha flag
0
Mm Hs LY86 0.07 0.2 NA 0.026 0.078 2 B cells naive Mesoderm Immune system MD-1,dJ80N2.1 lymphocyte antigen 86 flag
0
Mm Hs LTB 0.065 1 NA 0.159 0.045 5 B cells naive Mesoderm Immune system TNFSF3,TNFC lymphotoxin beta flag
0
Mm Hs IRF8 0.069 0.2 NA 0.026 0.075 4 B cells naive Mesoderm Immune system IRF-8,ICSBP,ICSBP1 interferon regulatory factor 8 Yflag
0
Hs IL4R 0.002 0.4 NA 0.008 NA 4 B cells naive Mesoderm Immune system CD124 interleukin 4 receptor Yflag
0
Mm Hs FOXP1 0.174 0.8 NA 0.23 0.162 1 B cells naive Mesoderm Immune system QRF1,12CC4,HSPC215,hFKH1B forkhead box P1 Yflag
0
Mm Hs CD74 0.169 1 NA 0.361 0.125 5 B cells naive Mesoderm Immune system DHLAG CD74 molecule flag
0
Mm Hs BIRC3 0.026 0.533 NA 0.081 0.015 2 B cells naive Mesoderm Immune system cIAP2,hiap-1,MIHC,RNF49,MALT2,c-IAP2,API2 baculoviral IAP repeat containing 3 flag
0
Mm Hs STAG3 0.006 0.067 NA 0.018 NA 1 B cells naive Mesoderm Immune system stromal antigen 3 Yflag
0
Hs LINC00926 0.003 0.933 NA 0.011 NA 1 B cells naive Mesoderm Immune system long intergenic non-protein coding RNA 926 flag
0
Mm Hs TNFRSF13C 0.008 0.933 NA 0.015 NA 2 B cells naive Mesoderm Immune system BAFFR,CD268 TNF receptor superfamily member 13C Yflag
0
Hs HLA-DQB1 0.012 0.867 NA 0.061 NA 3 B cells naive Mesoderm Immune system HLA-DQB major histocompatibility complex, class II, DQ beta 1 Yflag
0
Mm Hs CD52 0.181 1 NA 0.274 0.16 3 B cells naive Mesoderm Immune system HE5,EDDM5,CDW52 CD52 molecule flag
0
Mm Hs MITF 0.004 NA NA 0.006 0.003 5 B cells naive Mesoderm Immune system MI,bHLHe32,WS2A,WS2 melanogenesis associated transcription factor Yflag
0
Hs IGLL3P 0 NA NA NA NA 3 B cells naive Mesoderm Immune system 16.1,IGLL3 immunoglobulin lambda like polypeptide 3, pseudogene flag
0
Mm Hs TNFSF8 0.001 NA NA NA NA 1 B cells naive Mesoderm Immune system CD153,CD30LG TNF superfamily member 8 flag
0
Hs ZNF286A 0 NA NA 0.001 NA 1 B cells naive Mesoderm Immune system KIAA1874,ZNF286 zinc finger protein 286A flag
0
Mm Hs VPREB3 0.011 0.533 NA 0.014 NA 3 B cells naive Mesoderm Immune system 8HS20 V-set pre-B cell surrogate light chain 3 flag
0
Mm Hs UGT1A8 0 NA NA NA NA 1 B cells naive Mesoderm Immune system UGT1H UDP glucuronosyltransferase family 1 member A8 flag
0
Hs TCL1A 0.003 0.733 NA 0.012 NA 1 B cells naive Mesoderm Immune system TCL1 T cell leukemia/lymphoma 1A flag
0
Mm Hs STAP1 0.004 NA NA 0.003 NA 2 B cells naive Mesoderm Immune system STAP-1,BRDG1 signal transducing adaptor family member 1 Yflag
0
Mm Hs SPIB 0.01 NA NA 0.009 NA 5 B cells naive Mesoderm Immune system SPI-B Spi-B transcription factor flag
0
Mm Hs BANK1 0.006 0.533 NA 0.006 0.005 3 B cells naive Mesoderm Immune system BANK,FLJ20706 B cell scaffold protein with ankyrin repeats 1 flag
0
Mm Hs CD37 0.116 1 NA 0.212 0.095 3 B cells naive Mesoderm Immune system TSPAN26 CD37 molecule flag
0
Mm Hs CD22 0.003 0.067 NA 0.003 0.002 4 B cells naive Mesoderm Immune system SIGLEC-2,SIGLEC2 CD22 molecule flag
0
Hs CD1C 0.001 NA NA 0.005 NA 3 B cells naive Mesoderm Immune system CD1c molecule flag
0
Mm Hs CD180 0.012 NA NA 0.001 0.014 5 B cells naive Mesoderm Immune system RP105,Ly78,LY64 CD180 molecule flag
0
Mm Hs BRAF 0.025 NA NA 0.016 0.028 3 B cells naive Mesoderm Immune system BRAF1 B-Raf proto-oncogene, serine/threonine kinase Yflag
0
Mm Hs BLK 0.005 0.067 NA 0.002 0.004 2 B cells naive Mesoderm Immune system MGC10442 BLK proto-oncogene, Src family tyrosine kinase Yflag
0
Mm Hs BEND5 0.007 NA NA 0.002 0.008 1 B cells naive Mesoderm Immune system FLJ11588,C1orf165 BEN domain containing 5 flag
0
Mm Hs BCL7A 0.078 NA NA 0.014 0.095 1 B cells naive Mesoderm Immune system BCL7 BCL tumor suppressor 7A flag
0
Mm Hs CD69 0.024 0.667 NA 0.109 0.007 11 B cells naive Mesoderm Immune system CLEC2C CD69 molecule flag
0
Mm Hs BACH2 0.003 NA NA 0.002 0.004 3 B cells naive Mesoderm Immune system BTBD25 BTB domain and CNC homolog 2 flag
0
Mm Hs ADAM28 0.004 0.333 NA 0.016 0.001 2 B cells naive Mesoderm Immune system eMDCII,MDC-Lm,MDC-Ls,ADAM23 ADAM metallopeptidase domain 28 flag
0
Mm Hs ABCB4 0.002 NA NA NA 0.003 1 B cells naive Mesoderm Immune system MDR2,PFIC-3,GBD1,PGY3,MDR3 ATP binding cassette subfamily B member 4 Yflag
0
Mm Hs MME 0.017 NA NA 0.027 0.015 5 B cells naive Mesoderm Immune system CALLA,CD10 membrane metalloendopeptidase Yflag
0
Mm Hs IL2RA 0.009 NA NA 0.02 0.007 6 B cells naive Mesoderm Immune system IL2R,IDDM10 interleukin 2 receptor subunit alpha Yflag
0
Mm Hs CD72 0.003 NA NA 0.002 0.003 3 B cells naive Mesoderm Immune system LYB2,CD72b CD72 molecule flag
0
Mm Hs CD2 0.04 NA NA 0.094 0.03 9 B cells naive Mesoderm Immune system CD2 molecule flag
0
Hs FCRL2 0 NA NA NA NA 3 B cells naive Mesoderm Immune system FCRH2,IRTA4,CD307b,SPAP1 Fc receptor like 2 flag
0
Mm Hs IGKC 0.072 1 NA 0.159 0.054 4 B cells naive Mesoderm Immune system HCAK1 immunoglobulin kappa constant Yflag
0
Mm Hs IGHM 0.078 1 NA 0.051 0.083 4 B cells naive Mesoderm Immune system immunoglobulin heavy constant mu Yflag
0
Mm Hs IGHD 0.008 0.867 NA 0.005 0.008 4 B cells naive Mesoderm Immune system FLJ00382,FLJ46727,MGC29633 immunoglobulin heavy constant delta flag
0
Hs HLA-DOB 0.001 NA NA 0.005 NA 3 B cells naive Mesoderm Immune system major histocompatibility complex, class II, DO beta flag
0
Mm Hs HHEX 0.037 NA NA 0.023 0.04 8 B cells naive Mesoderm Immune system HEX,HOX11L-PEN,PRHX hematopoietically expressed homeobox flag
0
Hs GUSBP11 0 NA NA NA NA 3 B cells naive Mesoderm Immune system glucuronidase, beta pseudogene 11 flag
0
Hs GPR18 0.001 NA NA 0.007 NA 2 B cells naive Mesoderm Immune system G protein-coupled receptor 18 flag
0
Mm Hs FRK 0.005 NA NA 0.007 0.004 2 B cells naive Mesoderm Immune system RAK,PTK5 fyn related Src family tyrosine kinase flag
0
Mm Hs FCGR2B 0.031 NA NA 0.005 0.036 5 B cells naive Mesoderm Immune system CD32B Fc fragment of IgG receptor IIb Yflag
0
Hs FCER2 0.002 0.4 NA 0 NA 4 B cells naive Mesoderm Immune system CLEC4J,CD23,CD23A,FCE2 Fc fragment of IgE receptor II flag
0
Mm Hs EAF2 0.009 0.133 NA 0.03 0.003 3 B cells naive Mesoderm Immune system BM040,TRAITS ELL associated factor 2 flag
0
Mm Hs CXCR5 0.001 NA NA NA 0.001 4 B cells naive Mesoderm Immune system MDR15,CD185,BLR1 C-X-C motif chemokine receptor 5 flag
0
Mm Hs CR2 0.001 NA NA 0.001 0.001 4 B cells naive Mesoderm Immune system CD21,C3DR complement C3d receptor 2 Yflag
0
Mm Hs CD79B 0.028 1 NA 0.038 0.024 3 B cells naive Mesoderm Immune system IGB CD79b molecule Yflag
0
Mm Hs CD79A 0.024 0.933 NA 0.039 0.018 4 B cells naive Mesoderm Immune system MB-1,IGA CD79a molecule Yflag
-1
Mm Hs CD19 0.007 NA NA 0.008 0.006 5 B cells naive Mesoderm Immune system CD19 molecule Yflag

Datasets with computationally identified B cells naive

SRA SRS tissue cluster cell type p-value FDR View
SRA713577 SRS3363004 Peripheral blood mononuclear cells 8 B cells naive 1.47E-17 1.11E-14 view data
SRA779509 SRS3805247 Bone marrow 1 B cells naive 1.55E-7 3.33E-5 view data
SRA779509 SRS3805268 Bone marrow 3 B cells naive 5.99E-14 2.59E-11 view data
SRA716608 SRS3391632 Liver 17 B cells naive 3.36E-9 5.38E-7 view data
SRA617020 SRS2566665 B cells 2 B cells naive 7.25E-12 1.60E-9 view data
SRA749327 SRS3693912 PBMC 4 B cells naive 1.85E-5 5.45E-3 view data
SRA779509 SRS3805246 Bone marrow 4 B cells naive 2.43E-8 8.96E-6 view data
SRA749327 SRS3693911 PBMC 8 B cells naive 4.99E-13 1.69E-10 view data
SRA617020 SRS2566664 B cells 1 B cells naive 2.03E-13 9.98E-11 view data
SRA617020 SRS2566664 B cells 2 B cells naive 3.58E-7 5.87E-5 view data
SRA779509 SRS3805262 Bone marrow 5 B cells naive 6.63E-16 2.87E-13 view data
SRA779509 SRS3805265 Bone marrow 2 B cells naive 7.30E-7 9.34E-5 view data
SRA779509 SRS3805248 Bone marrow 1 B cells naive 4.10E-10 1.19E-7 view data
SRA749327 SRS3693910 PBMC 1 B cells naive 5.37E-11 9.13E-9 view data
SRA779509 SRS3805249 Bone marrow 2 B cells naive 3.07E-6 6.42E-4 view data