Mesenteric lymph nodes
| SRA | SRA628029 |
| SRS | SRS3348009 |
| SRR | SRR7227542 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina NovaSeq 6000 |
| Full-length mRNA-seq | No |
| Number of cells | 2,579 |
| Number of exp. genes | 23,561 (median number of expressed genes per cell=1706) |
| Number of clusters | 15 |
| Tissue | Mesenteric lymph nodes |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=mLN-SPF|cell type=mLNs (small intestinal and colon/caecum-draining)|antibody=CD24- CD45-|index id=SI-GA-B6|index seq=CGTTAATC,GCCACGCT,TTACTCAG,AAGGGTGA|;GSM3162137: B6; Mus musculus; OTHER |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Endothelial cells, Fibroblasts, Hepatic stellate cells, Pericytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.