SRA | SRA628029 |
SRS | SRS3348010 |
SRR | SRR7227541 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | Illumina NovaSeq 6000 |
Full-length mRNA-seq | No |
Number of cells | 3,760 |
Number of exp. genes | 25,052 (median number of expressed genes per cell=2014) |
Number of clusters | 14 |
Tissue | Periaortic lymph nodes |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | Yes |
Target cell population | |
Metadata (raw) | source_name=pLN-SPF|cell type=skin-draining pLNs (inguinal and axillary)|antibody=CD24- CD45-|index id=SI-GA-B5|index seq=AATAATGG,CCAGGGCA,TGCCTCAT,GTGTCATC|;GSM3162136: B5; Mus musculus; OTHER |
Gene search |
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Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Endothelial cells, Fibroblasts, Pericytes, Unknown list all |