SRA | SRA667466 |
SRS | SRS3059963 |
SRR | SRR6854159 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | Illumina HiSeq 2500 |
Full-length mRNA-seq | No |
Number of cells | 1,215 |
Number of exp. genes | 23,614 (median number of expressed genes per cell=1165) |
Number of clusters | 9 |
Tissue | Hippocampus (ca1) |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | No |
Target cell population | |
Metadata (raw) | strain=vGat-tdTomato|isolate=CAint05, CAint06, CAint07|age=p27|sex=pooled male and female|tissue=CA1|cell_index=SI-3A-G11|BioSampleModel=Model organism or animal|;RNA-Seq of mouse CA1 |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Astrocytes, Endothelial cells, Erythroid-like and erythroid precursor cells, Interneurons, Microglia, Neurons, Oligodendrocytes, Unknown list all |