SRA | SRA675945 |
SRS | SRS3100156 |
SRR | SRR6908386 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | Illumina NovaSeq 6000 |
Full-length mRNA-seq | No |
Number of cells | 4,121 |
Number of exp. genes | 29,570 (median number of expressed genes per cell=2599) |
Number of clusters | 27 |
Tissue | Hippocampus |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | No |
Target cell population | |
Metadata (raw) | source_name=Hippocampus_LPS|strain=C57BL/6|age=post natal day 14|treated with=10 mg/kg LPS (i.p. injection) for 2 hours|tissue=Hippocampus|;GSM3070099: LPS03; Mus musculus; RNA-Seq |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Astrocytes, Cajal-Retzius cells, Endothelial cells, Erythroid-like and erythroid precursor cells, Fibroblasts, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Pericytes, Unknown list all |