Skeletal muscle macrophages from hindlimb
| SRA | SRA688834 |
| SRS | SRS3165516 |
| SRR | SRR6998060 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 2500 |
| Full-length mRNA-seq | No |
| Number of cells | 1,000 |
| Number of exp. genes | 19,831 (median number of expressed genes per cell=2799) |
| Number of clusters | 8 |
| Tissue | Skeletal muscle macrophages from hindlimb |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Hindlimb muscle|strain=C57BL/6|tissue=skeletal muscle|cell type=macrophage|cell markers=7AAD-CD45+CD64+MerTK+|ctx-injury day=4 days post-CTX|infection status=T. gondii infected|;GSM3097065: Inf_plus_CTX_rep1; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Macrophages, T memory cells list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.