Skeletal muscle macrophages from hindlimb
SRA SRA688834
SRS SRS3165517
SRR SRR6998061
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 666
Number of exp. genes 17,654 (median number of expressed genes per cell=2299)
Number of clusters 7
Tissue Skeletal muscle macrophages from hindlimb
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Hindlimb muscle|strain=C57BL/6|tissue=skeletal muscle|cell type=macrophage|cell markers=7AAD-CD45+CD64+MerTK+|ctx-injury day=4 days post-CTX|infection status=T. gondii infected|;GSM3097066: Inf_plus_CTX_rep2; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Macrophages list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.