Inflamed area of colon
| SRA | SRA728025 |
| SRS | SRS3454421 |
| SRR | SRR7420400 |
| Species | Homo sapiens |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina NovaSeq 6000 |
| Full-length mRNA-seq | No |
| Number of cells | 1,883 |
| Number of exp. genes | 28,359 (median number of expressed genes per cell=805) |
| Number of clusters | 14 |
| Tissue | Inflamed area of colon |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=UC_inflamed|subject status=Ulcerative colitis|tissue=inflamed area of colon|cell type=epithelial cells|;GSM3214201: A3_inflamed; Homo sapiens; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | B cells, Basal cells, Dendritic cells, Epithelial cells, Goblet cells, NK cells, T cells, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.