Lung
| SRA | SRA862468 |
| SRS | SRS4512237 |
| SRR | SRR8755914 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina NovaSeq 6000 |
| Full-length mRNA-seq | No |
| Number of cells | 1,776 |
| Number of exp. genes | 25,144 (median number of expressed genes per cell=1529) |
| Number of clusters | 17 |
| Tissue | Lung |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | strain=C57BL/6|age=6-8 weeks|sex=male|tissue=Lung|sample_type=Single cell RNA-Seq|humidity_condition=50% RH|cell_types=Whole lung|infection_state=infected|replicate=replicate 2|BioSampleModel=Model organism or animal|;Single cell RNA-seq 50% RH infected |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Alveolar macrophages, B cells, Clara cells, Endothelial cells, Erythroid-like and erythroid precursor cells, Fibroblasts, Macrophages, Monocytes, Neutrophils, NK cells, Pericytes, Pulmonary alveolar type I cells, T memory cells, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.